Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col4a3bpQ9EQG9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a3bpQ9EQG9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col4a3bpQ9EQG9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col4a3bpQ9EQG9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Gm6576-201ENSMUST00000169678 883 ntBASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a3bpQ9EQG9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Col4a3bpQ9EQG9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.74■□□□□ 0.75
Col4a3bpQ9EQG9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a3bpQ9EQG9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a3bpQ9EQG9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.73■□□□□ 0.75
Col4a3bpQ9EQG9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a3bpQ9EQG9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col4a3bpQ9EQG9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a3bpQ9EQG9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a3bpQ9EQG9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a3bpQ9EQG9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col4a3bpQ9EQG9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a3bpQ9EQG9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms