Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upf1Q9EPU0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upf1Q9EPU0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.64■□□□□ 0.73
Upf1Q9EPU0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Gm43767-201ENSMUST00000198933 381 ntBASIC19.64■□□□□ 0.73
Upf1Q9EPU0 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upf1Q9EPU0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.63■□□□□ 0.73
Upf1Q9EPU0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upf1Q9EPU0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Upf1Q9EPU0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upf1Q9EPU0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Upf1Q9EPU0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upf1Q9EPU0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Upf1Q9EPU0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upf1Q9EPU0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upf1Q9EPU0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upf1Q9EPU0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms