Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mir6982-201ENSMUST00000184354 68 ntBASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chmp2aQ9DB34 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp2aQ9DB34 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp2aQ9DB34 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.02■□□□□ 0.47
Chmp2aQ9DB34 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Mir5122-201ENSMUST00000175004 89 ntBASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2aQ9DB34 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18■□□□□ 0.47
Chmp2aQ9DB34 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Arhgef4-208ENSMUST00000211073 171 ntBASIC18■□□□□ 0.47
Chmp2aQ9DB34 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2aQ9DB34 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Chmp2aQ9DB34 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Gm37055-201ENSMUST00000191866 133 ntBASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Gm5417-201ENSMUST00000079706 384 ntBASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2aQ9DB34 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2aQ9DB34 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2aQ9DB34 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.98■□□□□ 0.47
Chmp2aQ9DB34 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2aQ9DB34 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.98■□□□□ 0.47
Chmp2aQ9DB34 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2aQ9DB34 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2aQ9DB34 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2aQ9DB34 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2aQ9DB34 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2aQ9DB34 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Timm23-208ENSMUST00000226683 750 ntBASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2aQ9DB34 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms