Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco2Q9DA21 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smco2Q9DA21 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.44■□□□□ 0.7
Smco2Q9DA21 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco2Q9DA21 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smco2Q9DA21 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.43■□□□□ 0.7
Smco2Q9DA21 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smco2Q9DA21 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smco2Q9DA21 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smco2Q9DA21 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Gm18959-201ENSMUST00000208954 655 ntBASIC19.42■□□□□ 0.7
Smco2Q9DA21 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smco2Q9DA21 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Gm24841-201ENSMUST00000158676 357 ntBASIC19.41■□□□□ 0.7
Smco2Q9DA21 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.41■□□□□ 0.7
Smco2Q9DA21 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco2Q9DA21 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smco2Q9DA21 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco2Q9DA21 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco2Q9DA21 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smco2Q9DA21 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Smco2Q9DA21 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smco2Q9DA21 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smco2Q9DA21 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smco2Q9DA21 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smco2Q9DA21 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smco2Q9DA21 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco2Q9DA21 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.39■□□□□ 0.69
Smco2Q9DA21 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smco2Q9DA21 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco2Q9DA21 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco2Q9DA21 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco2Q9DA21 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms