Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp5Q9D7S9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp5Q9D7S9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp5Q9D7S9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp5Q9D7S9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21.59■■□□□ 1.05
Chmp5Q9D7S9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC21.58■■□□□ 1.05
Chmp5Q9D7S9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp5Q9D7S9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp5Q9D7S9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp5Q9D7S9 Gm10849-201ENSMUST00000100397 618 ntBASIC21.58■■□□□ 1.05
Chmp5Q9D7S9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp5Q9D7S9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Chmp5Q9D7S9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.58■■□□□ 1.04
Chmp5Q9D7S9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chmp5Q9D7S9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chmp5Q9D7S9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chmp5Q9D7S9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Gm26571-201ENSMUST00000181399 666 ntBASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Gm26524-201ENSMUST00000192339 390 ntBASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp5Q9D7S9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Gm11927-201ENSMUST00000118472 759 ntBASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Gm37166-201ENSMUST00000195473 2474 ntBASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC21.56■■□□□ 1.04
Chmp5Q9D7S9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp5Q9D7S9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp5Q9D7S9 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.55■■□□□ 1.04
Chmp5Q9D7S9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp5Q9D7S9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.55■■□□□ 1.04
Chmp5Q9D7S9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp5Q9D7S9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp5Q9D7S9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Chmp5Q9D7S9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Chmp5Q9D7S9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.55■■□□□ 1.04
Chmp5Q9D7S9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms