Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpap3Q9D706 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Actl10-202ENSMUST00000226583 1501 ntBASIC19.01■□□□□ 0.63
Rpap3Q9D706 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Gm9013-201ENSMUST00000132939 882 ntBASIC19.01■□□□□ 0.63
Rpap3Q9D706 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Gm26039-201ENSMUST00000158152 144 ntBASIC19.01■□□□□ 0.63
Rpap3Q9D706 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Gm5587-201ENSMUST00000206270 674 ntBASIC19.01■□□□□ 0.63
Rpap3Q9D706 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpap3Q9D706 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 Gm8258-201ENSMUST00000055593 1449 ntBASIC19■□□□□ 0.63
Rpap3Q9D706 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rpap3Q9D706 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rpap3Q9D706 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19■□□□□ 0.63
Rpap3Q9D706 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rpap3Q9D706 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 Gm7367-201ENSMUST00000057611 492 ntBASIC19■□□□□ 0.63
Rpap3Q9D706 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rpap3Q9D706 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rpap3Q9D706 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Rpap3Q9D706 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Gm11355-201ENSMUST00000121120 306 ntBASIC18.99■□□□□ 0.63
Rpap3Q9D706 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.99■□□□□ 0.63
Rpap3Q9D706 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Gm10566-201ENSMUST00000086739 996 ntBASIC18.99■□□□□ 0.63
Rpap3Q9D706 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpap3Q9D706 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Gm8969-201ENSMUST00000199694 526 ntBASIC18.98■□□□□ 0.63
Rpap3Q9D706 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rpap3Q9D706 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Rpap3Q9D706 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms