Protein–RNA interactions for Protein: Q9D4F8

Tubgcp4, Gamma-tubulin complex component 4, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4Q9D4F8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubgcp4Q9D4F8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubgcp4Q9D4F8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Gm18032-201ENSMUST00000222541 538 ntBASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp4Q9D4F8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.39■□□□□ 0.54
Tubgcp4Q9D4F8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tubgcp4Q9D4F8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tubgcp4Q9D4F8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Tubgcp4Q9D4F8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp4Q9D4F8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Gm16061-201ENSMUST00000122167 857 ntBASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tubgcp4Q9D4F8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp4Q9D4F8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp4Q9D4F8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.36■□□□□ 0.53
Tubgcp4Q9D4F8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.36■□□□□ 0.53
Tubgcp4Q9D4F8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp4Q9D4F8 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.36■□□□□ 0.53
Tubgcp4Q9D4F8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.36■□□□□ 0.53
Tubgcp4Q9D4F8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp4Q9D4F8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.36■□□□□ 0.53
Tubgcp4Q9D4F8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.36■□□□□ 0.53
Tubgcp4Q9D4F8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Tubgcp4Q9D4F8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms