Protein–RNA interactions for Protein: Q9D4E6

Pabpc6, Polyadenylate-binding protein, mousemouse

Known RBP Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc6Q9D4E6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pabpc6Q9D4E6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pabpc6Q9D4E6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pabpc6Q9D4E6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Gm13474-201ENSMUST00000122466 815 ntBASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc6Q9D4E6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc6Q9D4E6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Gm18032-201ENSMUST00000222541 538 ntBASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc6Q9D4E6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpc6Q9D4E6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpc6Q9D4E6 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.18■□□□□ 0.66
Pabpc6Q9D4E6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms