Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 Mir1199-201ENSMUST00000117015 119 ntBASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ddx56Q9D0R4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx56Q9D0R4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Gm22240-201ENSMUST00000175225 82 ntBASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx56Q9D0R4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx56Q9D0R4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx56Q9D0R4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx56Q9D0R4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.08■□□□□ 0.49
Ddx56Q9D0R4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.08■□□□□ 0.49
Ddx56Q9D0R4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx56Q9D0R4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx56Q9D0R4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx56Q9D0R4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx56Q9D0R4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ddx56Q9D0R4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx56Q9D0R4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.08■□□□□ 0.48
Ddx56Q9D0R4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Ddx56Q9D0R4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx56Q9D0R4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx56Q9D0R4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx56Q9D0R4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx56Q9D0R4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms