Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx47Q9CWX9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx47Q9CWX9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Ddx47Q9CWX9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ddx47Q9CWX9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.77■□□□□ 0.43
Ddx47Q9CWX9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx47Q9CWX9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx47Q9CWX9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx47Q9CWX9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx47Q9CWX9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx47Q9CWX9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx47Q9CWX9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx47Q9CWX9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ddx47Q9CWX9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ddx47Q9CWX9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx47Q9CWX9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx47Q9CWX9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx47Q9CWX9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx47Q9CWX9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx47Q9CWX9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Gm13234-201ENSMUST00000120010 747 ntBASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ddx47Q9CWX9 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.74■□□□□ 0.43
Ddx47Q9CWX9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx47Q9CWX9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx47Q9CWX9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx47Q9CWX9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms