Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Khdc3Q9CWU5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Khdc3Q9CWU5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Gm20760-201ENSMUST00000179197 648 ntBASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Gm37292-201ENSMUST00000192062 758 ntBASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Khdc3Q9CWU5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Khdc3Q9CWU5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Gm12382-201ENSMUST00000122005 922 ntBASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Khdc3Q9CWU5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Gm43183-201ENSMUST00000200632 547 ntBASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc3Q9CWU5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms