Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Gm7860-201ENSMUST00000121190 879 ntBASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.11□□□□□ -0.31
Chchd1Q9CQA6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chchd1Q9CQA6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chchd1Q9CQA6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chchd1Q9CQA6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chchd1Q9CQA6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chchd1Q9CQA6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chchd1Q9CQA6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chchd1Q9CQA6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chchd1Q9CQA6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chchd1Q9CQA6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chchd1Q9CQA6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chchd1Q9CQA6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chchd1Q9CQA6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chchd1Q9CQA6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chchd1Q9CQA6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Chchd1Q9CQA6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Chchd1Q9CQA6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms