Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Gm37292-201ENSMUST00000192062 758 ntBASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim11Q99PQ2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim11Q99PQ2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Gm4974-201ENSMUST00000209974 875 ntBASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim11Q99PQ2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim11Q99PQ2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Trim11Q99PQ2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim11Q99PQ2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Trim11Q99PQ2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trim11Q99PQ2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim11Q99PQ2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim11Q99PQ2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms