Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkd1Q99MH6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkd1Q99MH6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkd1Q99MH6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkd1Q99MH6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nkd1Q99MH6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Rab3c-203ENSMUST00000224180 967 ntBASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkd1Q99MH6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.31■□□□□ 0.2
Nkd1Q99MH6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Gm26524-201ENSMUST00000192339 390 ntBASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkd1Q99MH6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Gm13148-201ENSMUST00000118892 745 ntBASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Gm27405-201ENSMUST00000184201 112 ntBASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkd1Q99MH6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkd1Q99MH6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkd1Q99MH6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkd1Q99MH6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Nkd1Q99MH6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkd1Q99MH6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Nkd1Q99MH6 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.27■□□□□ 0.2
Nkd1Q99MH6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkd1Q99MH6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nkd1Q99MH6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkd1Q99MH6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Nkd1Q99MH6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkd1Q99MH6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkd1Q99MH6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkd1Q99MH6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkd1Q99MH6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nkd1Q99MH6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nkd1Q99MH6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Nkd1Q99MH6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkd1Q99MH6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkd1Q99MH6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkd1Q99MH6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkd1Q99MH6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms