Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
Rnf34Q99KR6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf34Q99KR6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf34Q99KR6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf34Q99KR6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.56■□□□□ 0.56
Rnf34Q99KR6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf34Q99KR6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf34Q99KR6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 Zfp783-201ENSMUST00000095946 670 ntBASIC18.54■□□□□ 0.56
Rnf34Q99KR6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf34Q99KR6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Gm10418-201ENSMUST00000100943 576 ntBASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Gm7290-201ENSMUST00000104990 617 ntBASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Gm12918-201ENSMUST00000120234 636 ntBASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Gm15710-201ENSMUST00000121821 636 ntBASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Gm6211-202ENSMUST00000167849 925 ntBASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Gm5075-201ENSMUST00000196916 622 ntBASIC18.53■□□□□ 0.56
Rnf34Q99KR6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf34Q99KR6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf34Q99KR6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf34Q99KR6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf34Q99KR6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rnf34Q99KR6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf34Q99KR6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf34Q99KR6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf34Q99KR6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rnf34Q99KR6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf34Q99KR6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf34Q99KR6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf34Q99KR6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf34Q99KR6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf34Q99KR6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms