Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfc4Q99J62 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rfc4Q99J62 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Rfc4Q99J62 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.86■□□□□ 0.77
Rfc4Q99J62 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.86■□□□□ 0.77
Rfc4Q99J62 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc4Q99J62 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Gm24589-201ENSMUST00000116692 94 ntBASIC19.85■□□□□ 0.77
Rfc4Q99J62 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Gm18115-201ENSMUST00000221209 621 ntBASIC19.85■□□□□ 0.77
Rfc4Q99J62 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.85■□□□□ 0.77
Rfc4Q99J62 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc4Q99J62 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc4Q99J62 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.84■□□□□ 0.77
Rfc4Q99J62 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.84■□□□□ 0.77
Rfc4Q99J62 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.84■□□□□ 0.77
Rfc4Q99J62 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.84■□□□□ 0.77
Rfc4Q99J62 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc4Q99J62 Grk6-206ENSMUST00000224995 2971 ntBASIC19.83■□□□□ 0.77
Rfc4Q99J62 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Rfc4Q99J62 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc4Q99J62 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc4Q99J62 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc4Q99J62 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.83■□□□□ 0.77
Rfc4Q99J62 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.83■□□□□ 0.77
Rfc4Q99J62 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc4Q99J62 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms