Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha3Q91Y16 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Mir5122-201ENSMUST00000175004 89 ntBASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Timm23-208ENSMUST00000226683 750 ntBASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha3Q91Y16 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha3Q91Y16 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha3Q91Y16 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Gm10517-202ENSMUST00000192970 758 ntBASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Gm4974-201ENSMUST00000209974 875 ntBASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Odf3b-204ENSMUST00000227834 930 ntBASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha3Q91Y16 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha3Q91Y16 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha3Q91Y16 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.02■□□□□ 0.47
Pcdha3Q91Y16 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha3Q91Y16 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha3Q91Y16 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Mir6982-201ENSMUST00000184354 68 ntBASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Gm37055-201ENSMUST00000191866 133 ntBASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha3Q91Y16 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms