Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Il3ra-202ENSMUST00000223589 738 ntBASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha9Q91Y11 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha9Q91Y11 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Gm27463-201ENSMUST00000183569 57 ntBASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha9Q91Y11 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Pcdha9Q91Y11 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha9Q91Y11 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha9Q91Y11 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Gm30025-201ENSMUST00000218555 728 ntBASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Gm7791-201ENSMUST00000219066 539 ntBASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha9Q91Y11 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdha9Q91Y11 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha9Q91Y11 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdha9Q91Y11 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha9Q91Y11 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdha9Q91Y11 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdha9Q91Y11 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms