Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
StrcQ8VIM6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
StrcQ8VIM6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Gm5264-201ENSMUST00000190584 848 ntBASIC20.67■□□□□ 0.9
StrcQ8VIM6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.67■□□□□ 0.9
StrcQ8VIM6 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.67■□□□□ 0.9
StrcQ8VIM6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
StrcQ8VIM6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.66■□□□□ 0.9
StrcQ8VIM6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
StrcQ8VIM6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.65■□□□□ 0.9
StrcQ8VIM6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.65■□□□□ 0.9
StrcQ8VIM6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
StrcQ8VIM6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
StrcQ8VIM6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
StrcQ8VIM6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
StrcQ8VIM6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
StrcQ8VIM6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
StrcQ8VIM6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
StrcQ8VIM6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
StrcQ8VIM6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.64■□□□□ 0.89
StrcQ8VIM6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
StrcQ8VIM6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
StrcQ8VIM6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
StrcQ8VIM6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
StrcQ8VIM6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
StrcQ8VIM6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
StrcQ8VIM6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
StrcQ8VIM6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Gm43575-201ENSMUST00000196420 516 ntBASIC20.63■□□□□ 0.89
StrcQ8VIM6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
StrcQ8VIM6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.62■□□□□ 0.89
StrcQ8VIM6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms