Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Gm13168-201ENSMUST00000121771 632 ntBASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.74■□□□□ 0.75
Trim29Q8R2Q0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim29Q8R2Q0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Gm8520-201ENSMUST00000186517 868 ntBASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Gm10517-202ENSMUST00000192970 758 ntBASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim29Q8R2Q0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Gm10698-201ENSMUST00000182663 604 ntBASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim29Q8R2Q0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim29Q8R2Q0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim29Q8R2Q0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim29Q8R2Q0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim29Q8R2Q0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim29Q8R2Q0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim29Q8R2Q0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim29Q8R2Q0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim29Q8R2Q0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim29Q8R2Q0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms