Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Gm14859-201ENSMUST00000117752 357 ntBASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.2■□□□□ 0.34
Zcchc9Q8R1J3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zcchc9Q8R1J3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Zcchc9Q8R1J3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zcchc9Q8R1J3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms