Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3a1Q8K4Z5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a1Q8K4Z5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3a1Q8K4Z5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Mir6982-201ENSMUST00000184354 68 ntBASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a1Q8K4Z5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sf3a1Q8K4Z5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.08■□□□□ 0.96
Sf3a1Q8K4Z5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sf3a1Q8K4Z5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Gm7638-201ENSMUST00000121348 967 ntBASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sf3a1Q8K4Z5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms