Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm28Q8CGC6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Gm18032-201ENSMUST00000222541 538 ntBASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rbm28Q8CGC6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rbm28Q8CGC6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rbm28Q8CGC6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rbm28Q8CGC6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rbm28Q8CGC6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rbm28Q8CGC6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Mir5130-201ENSMUST00000175160 84 ntBASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Rarb-207ENSMUST00000225921 2756 ntBASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rbm28Q8CGC6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Rbm28Q8CGC6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Gm10013-201ENSMUST00000106074 672 ntBASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Gm7638-201ENSMUST00000121348 967 ntBASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rbm28Q8CGC6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbm28Q8CGC6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbm28Q8CGC6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.36■□□□□ 0.85
Rbm28Q8CGC6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbm28Q8CGC6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbm28Q8CGC6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbm28Q8CGC6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbm28Q8CGC6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbm28Q8CGC6 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rbm28Q8CGC6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rbm28Q8CGC6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rbm28Q8CGC6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rbm28Q8CGC6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms