Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc28bQ8CEG5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc28bQ8CEG5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc28bQ8CEG5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Gm29791-202ENSMUST00000207888 369 ntBASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc28bQ8CEG5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc28bQ8CEG5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc28bQ8CEG5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.03■□□□□ 0.32
Ccdc28bQ8CEG5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms