Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc38Q8CDN8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.18■□□□□ 0.66
Ccdc38Q8CDN8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.18■□□□□ 0.66
Ccdc38Q8CDN8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.18■□□□□ 0.66
Ccdc38Q8CDN8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc38Q8CDN8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc38Q8CDN8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc38Q8CDN8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc38Q8CDN8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Gm37856-201ENSMUST00000191634 999 ntBASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Gm37292-201ENSMUST00000192062 758 ntBASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc38Q8CDN8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Gm18666-201ENSMUST00000190039 958 ntBASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc38Q8CDN8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc38Q8CDN8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc38Q8CDN8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc38Q8CDN8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Ccdc38Q8CDN8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc38Q8CDN8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.14■□□□□ 0.66
Ccdc38Q8CDN8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc38Q8CDN8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.14■□□□□ 0.65
Ccdc38Q8CDN8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc38Q8CDN8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc38Q8CDN8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccdc38Q8CDN8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc38Q8CDN8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ccdc38Q8CDN8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc38Q8CDN8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc38Q8CDN8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc38Q8CDN8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc38Q8CDN8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms