Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp44Q8C2S0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp44Q8C2S0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp44Q8C2S0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp44Q8C2S0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp44Q8C2S0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp44Q8C2S0 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.19■□□□□ 0.82
Usp44Q8C2S0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Usp44Q8C2S0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp44Q8C2S0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.19■□□□□ 0.82
Usp44Q8C2S0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp44Q8C2S0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp44Q8C2S0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp44Q8C2S0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.18■□□□□ 0.82
Usp44Q8C2S0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Gm30025-201ENSMUST00000218555 728 ntBASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp44Q8C2S0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Gm27000-201ENSMUST00000182943 842 ntBASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Gm27463-201ENSMUST00000183569 57 ntBASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Usp44Q8C2S0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp44Q8C2S0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp44Q8C2S0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.15■□□□□ 0.82
Usp44Q8C2S0 Gm11539-201ENSMUST00000119837 557 ntBASIC20.15■□□□□ 0.82
Usp44Q8C2S0 Gm13436-201ENSMUST00000120418 567 ntBASIC20.15■□□□□ 0.82
Usp44Q8C2S0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp44Q8C2S0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms