Protein–RNA interactions for Protein: Q8C0S4

Ttc21a, Tetratricopeptide repeat protein 21A, mousemouse

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc21aQ8C0S4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ttc21aQ8C0S4 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.97■■□□□ 1.11
Ttc21aQ8C0S4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc21aQ8C0S4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc21aQ8C0S4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc21aQ8C0S4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc21aQ8C0S4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.96■■□□□ 1.11
Ttc21aQ8C0S4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc21aQ8C0S4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc21aQ8C0S4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc21aQ8C0S4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc21aQ8C0S4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc21aQ8C0S4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc21aQ8C0S4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc21aQ8C0S4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc21aQ8C0S4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc21aQ8C0S4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc21aQ8C0S4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc21aQ8C0S4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc21aQ8C0S4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc21aQ8C0S4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc21aQ8C0S4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc21aQ8C0S4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc21aQ8C0S4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc21aQ8C0S4 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.92■■□□□ 1.1
Ttc21aQ8C0S4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.92■■□□□ 1.1
Ttc21aQ8C0S4 Gm2274-201ENSMUST00000184539 609 ntBASIC21.92■■□□□ 1.1
Ttc21aQ8C0S4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.92■■□□□ 1.1
Ttc21aQ8C0S4 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.92■■□□□ 1.1
Ttc21aQ8C0S4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Ttc21aQ8C0S4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Ttc21aQ8C0S4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ttc21aQ8C0S4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc21aQ8C0S4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc21aQ8C0S4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Gm16061-201ENSMUST00000122167 857 ntBASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Gm9987-201ENSMUST00000069768 567 ntBASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc21aQ8C0S4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Gm45058-201ENSMUST00000205810 766 ntBASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc21aQ8C0S4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms