Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Sh3rf2Q8BZT2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf2Q8BZT2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf2Q8BZT2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf2Q8BZT2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Gm18958-201ENSMUST00000174258 762 ntBASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Gm10566-201ENSMUST00000086739 996 ntBASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sh3rf2Q8BZT2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Gm5587-201ENSMUST00000206270 674 ntBASIC17.46■□□□□ 0.39
Sh3rf2Q8BZT2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms