Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trerf1Q8BXJ2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trerf1Q8BXJ2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trerf1Q8BXJ2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trerf1Q8BXJ2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trerf1Q8BXJ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trerf1Q8BXJ2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trerf1Q8BXJ2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Gm10138-203ENSMUST00000206952 366 ntBASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trerf1Q8BXJ2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Trerf1Q8BXJ2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trerf1Q8BXJ2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trerf1Q8BXJ2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trerf1Q8BXJ2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trerf1Q8BXJ2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.14■□□□□ 0.49
Trerf1Q8BXJ2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trerf1Q8BXJ2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trerf1Q8BXJ2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trerf1Q8BXJ2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.14■□□□□ 0.49
Trerf1Q8BXJ2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trerf1Q8BXJ2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
Trerf1Q8BXJ2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Trerf1Q8BXJ2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Gm15375-201ENSMUST00000119510 849 ntBASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trerf1Q8BXJ2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Gm10698-201ENSMUST00000182663 604 ntBASIC18.11■□□□□ 0.49
Trerf1Q8BXJ2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms