Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.33■□□□□ 0.04
Ube3dQ8BX13 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ube3dQ8BX13 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3dQ8BX13 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3dQ8BX13 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3dQ8BX13 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.33■□□□□ 0.04
Ube3dQ8BX13 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.33■□□□□ 0.04
Ube3dQ8BX13 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ube3dQ8BX13 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3dQ8BX13 Haglr-201ENSMUST00000100000 2085 ntBASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3dQ8BX13 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Gm18025-201ENSMUST00000221733 862 ntBASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3dQ8BX13 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Gm43183-201ENSMUST00000200632 547 ntBASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Gm42545-201ENSMUST00000202755 922 ntBASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3dQ8BX13 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Gm37055-201ENSMUST00000191866 133 ntBASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3dQ8BX13 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Mir6349-201ENSMUST00000184059 97 ntBASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3dQ8BX13 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3dQ8BX13 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3dQ8BX13 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3dQ8BX13 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3dQ8BX13 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms