Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne3Q8BT60 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne3Q8BT60 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne3Q8BT60 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne3Q8BT60 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne3Q8BT60 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cpne3Q8BT60 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne3Q8BT60 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne3Q8BT60 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.7■□□□□ 0.26
Cpne3Q8BT60 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpne3Q8BT60 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpne3Q8BT60 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne3Q8BT60 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Gm12896-201ENSMUST00000118430 226 ntBASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cpne3Q8BT60 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms