Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Gm27742-201ENSMUST00000184667 60 ntBASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smarcal1Q8BJL0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Mir3081-201ENSMUST00000175305 84 ntBASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcal1Q8BJL0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smarcal1Q8BJL0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcal1Q8BJL0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcal1Q8BJL0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcal1Q8BJL0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcal1Q8BJL0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.33■□□□□ 0.52
Smarcal1Q8BJL0 Mir770-201ENSMUST00000103252 94 ntBASIC18.33■□□□□ 0.52
Smarcal1Q8BJL0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcal1Q8BJL0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.33■□□□□ 0.52
Smarcal1Q8BJL0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.33■□□□□ 0.52
Smarcal1Q8BJL0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcal1Q8BJL0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Smarcal1Q8BJL0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Smarcal1Q8BJL0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcal1Q8BJL0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Smarcal1Q8BJL0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcal1Q8BJL0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcal1Q8BJL0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcal1Q8BJL0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcal1Q8BJL0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcal1Q8BJL0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcal1Q8BJL0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcal1Q8BJL0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcal1Q8BJL0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcal1Q8BJL0 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms