Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2bQ8BJF9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.69■□□□□ 0.42
Chmp2bQ8BJF9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chmp2bQ8BJF9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2bQ8BJF9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2bQ8BJF9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.69■□□□□ 0.42
Chmp2bQ8BJF9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Chmp2bQ8BJF9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Gm8495-201ENSMUST00000188740 694 ntBASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Chmp2bQ8BJF9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp2bQ8BJF9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Gm27405-201ENSMUST00000184201 112 ntBASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp2bQ8BJF9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp2bQ8BJF9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Chmp2bQ8BJF9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp2bQ8BJF9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp2bQ8BJF9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.63■□□□□ 0.41
Chmp2bQ8BJF9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms