Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Gm26039-201ENSMUST00000158152 144 ntBASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Gm17807-201ENSMUST00000186869 298 ntBASIC18.17■□□□□ 0.5
Nod1Q8BHB0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nod1Q8BHB0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nod1Q8BHB0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nod1Q8BHB0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nod1Q8BHB0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Gm17971-201ENSMUST00000190239 806 ntBASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nod1Q8BHB0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Gm11950-201ENSMUST00000121615 838 ntBASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Gm18958-201ENSMUST00000174258 762 ntBASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Gm10566-201ENSMUST00000086739 996 ntBASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nod1Q8BHB0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms