Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.75■□□□□ 0.27
Smndc1Q8BGT7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Gm13146-201ENSMUST00000118508 780 ntBASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Mir5133-201ENSMUST00000174955 77 ntBASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smndc1Q8BGT7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Gm7860-201ENSMUST00000121190 879 ntBASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smndc1Q8BGT7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.72■□□□□ 0.27
Smndc1Q8BGT7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms