Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim50Q810I2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim50Q810I2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim50Q810I2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim50Q810I2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim50Q810I2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trim50Q810I2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.83■□□□□ 0.28
Trim50Q810I2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Trim50Q810I2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim50Q810I2 Mir1199-201ENSMUST00000117015 119 ntBASIC16.83■□□□□ 0.28
Trim50Q810I2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim50Q810I2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim50Q810I2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim50Q810I2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim50Q810I2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trim50Q810I2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim50Q810I2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim50Q810I2 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.83■□□□□ 0.28
Trim50Q810I2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim50Q810I2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim50Q810I2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim50Q810I2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim50Q810I2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim50Q810I2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim50Q810I2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim50Q810I2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim50Q810I2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.82■□□□□ 0.28
Trim50Q810I2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim50Q810I2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim50Q810I2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim50Q810I2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim50Q810I2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Gm10812-201ENSMUST00000099864 546 ntBASIC16.81■□□□□ 0.28
Trim50Q810I2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trim50Q810I2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Trim50Q810I2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim50Q810I2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim50Q810I2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim50Q810I2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim50Q810I2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim50Q810I2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim50Q810I2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim50Q810I2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim50Q810I2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim50Q810I2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim50Q810I2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim50Q810I2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim50Q810I2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim50Q810I2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim50Q810I2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim50Q810I2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim50Q810I2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Trim50Q810I2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim50Q810I2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim50Q810I2 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.79■□□□□ 0.28
Trim50Q810I2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim50Q810I2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.78■□□□□ 0.28
Trim50Q810I2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Trim50Q810I2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms