Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.87■□□□□ 0.45
Trim62Q80V85 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim62Q80V85 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.87■□□□□ 0.45
Trim62Q80V85 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim62Q80V85 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Trim62Q80V85 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim62Q80V85 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim62Q80V85 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim62Q80V85 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim62Q80V85 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim62Q80V85 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim62Q80V85 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim62Q80V85 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trim62Q80V85 Gm7791-201ENSMUST00000219066 539 ntBASIC17.86■□□□□ 0.45
Trim62Q80V85 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trim62Q80V85 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Trim62Q80V85 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim62Q80V85 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim62Q80V85 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim62Q80V85 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim62Q80V85 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.86■□□□□ 0.45
Trim62Q80V85 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Trim62Q80V85 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim62Q80V85 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim62Q80V85 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim62Q80V85 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim62Q80V85 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim62Q80V85 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim62Q80V85 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim62Q80V85 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim62Q80V85 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.85■□□□□ 0.45
Trim62Q80V85 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim62Q80V85 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim62Q80V85 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim62Q80V85 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim62Q80V85 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim62Q80V85 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim62Q80V85 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim62Q80V85 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim62Q80V85 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim62Q80V85 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim62Q80V85 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim62Q80V85 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Trim62Q80V85 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.84■□□□□ 0.45
Trim62Q80V85 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim62Q80V85 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim62Q80V85 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim62Q80V85 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim62Q80V85 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Trim62Q80V85 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim62Q80V85 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim62Q80V85 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Trim62Q80V85 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim62Q80V85 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim62Q80V85 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.83■□□□□ 0.44
Trim62Q80V85 Gm15565-201ENSMUST00000118890 427 ntBASIC17.83■□□□□ 0.44
Trim62Q80V85 Gm11539-201ENSMUST00000119837 557 ntBASIC17.83■□□□□ 0.44
Trim62Q80V85 Gm13436-201ENSMUST00000120418 567 ntBASIC17.83■□□□□ 0.44
Trim62Q80V85 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim62Q80V85 Gm2274-201ENSMUST00000184539 609 ntBASIC17.83■□□□□ 0.44
Trim62Q80V85 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim62Q80V85 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.83■□□□□ 0.44
Trim62Q80V85 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim62Q80V85 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim62Q80V85 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim62Q80V85 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim62Q80V85 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim62Q80V85 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim62Q80V85 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim62Q80V85 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim62Q80V85 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim62Q80V85 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms