Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.92■□□□□ 0.14
Pif1Q80SX8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Gm7370-201ENSMUST00000219471 767 ntBASIC15.92■□□□□ 0.14
Pif1Q80SX8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pif1Q80SX8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.91■□□□□ 0.14
Pif1Q80SX8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.91■□□□□ 0.14
Pif1Q80SX8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.91■□□□□ 0.14
Pif1Q80SX8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pif1Q80SX8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pif1Q80SX8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pif1Q80SX8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pif1Q80SX8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.9■□□□□ 0.14
Pif1Q80SX8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Pif1Q80SX8 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.9■□□□□ 0.14
Pif1Q80SX8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pif1Q80SX8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pif1Q80SX8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pif1Q80SX8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pif1Q80SX8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pif1Q80SX8 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.9■□□□□ 0.14
Pif1Q80SX8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pif1Q80SX8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pif1Q80SX8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pif1Q80SX8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pif1Q80SX8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pif1Q80SX8 Mir1668-201ENSMUST00000184114 107 ntBASIC15.89■□□□□ 0.13
Pif1Q80SX8 Gm5587-201ENSMUST00000206270 674 ntBASIC15.89■□□□□ 0.13
Pif1Q80SX8 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.89■□□□□ 0.13
Pif1Q80SX8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pif1Q80SX8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Pif1Q80SX8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pif1Q80SX8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pif1Q80SX8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.88■□□□□ 0.13
Pif1Q80SX8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Gm27704-201ENSMUST00000185094 107 ntBASIC15.88■□□□□ 0.13
Pif1Q80SX8 Gm37025-201ENSMUST00000195159 829 ntBASIC15.88■□□□□ 0.13
Pif1Q80SX8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Gm9731-201ENSMUST00000209480 747 ntBASIC15.88■□□□□ 0.13
Pif1Q80SX8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pif1Q80SX8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms