Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox11Q7M6Y2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox11Q7M6Y2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sox11Q7M6Y2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox11Q7M6Y2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox11Q7M6Y2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Gm18958-201ENSMUST00000174258 762 ntBASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox11Q7M6Y2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Gm27357-201ENSMUST00000183754 135 ntBASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Gm7213-201ENSMUST00000215977 950 ntBASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Gm7461-201ENSMUST00000058918 827 ntBASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox11Q7M6Y2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox11Q7M6Y2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Gm9731-201ENSMUST00000209480 747 ntBASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox11Q7M6Y2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 Gm44771-201ENSMUST00000206975 626 ntBASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox11Q7M6Y2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms