Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Vma21Q78T54 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Vma21Q78T54 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Vma21Q78T54 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vma21Q78T54 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Vma21Q78T54 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vma21Q78T54 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vma21Q78T54 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 Gm10849-201ENSMUST00000100397 618 ntBASIC14.08□□□□□ -0.16
Vma21Q78T54 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Vma21Q78T54 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.08□□□□□ -0.16
Vma21Q78T54 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.08□□□□□ -0.16
Vma21Q78T54 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.08□□□□□ -0.16
Vma21Q78T54 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vma21Q78T54 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.08□□□□□ -0.16
Vma21Q78T54 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vma21Q78T54 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.07□□□□□ -0.16
Vma21Q78T54 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.07□□□□□ -0.16
Vma21Q78T54 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.07□□□□□ -0.16
Vma21Q78T54 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Vma21Q78T54 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Gm26571-201ENSMUST00000181399 666 ntBASIC14.07□□□□□ -0.16
Vma21Q78T54 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.07□□□□□ -0.16
Vma21Q78T54 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.07□□□□□ -0.16
Vma21Q78T54 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.07□□□□□ -0.16
Vma21Q78T54 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.07□□□□□ -0.16
Vma21Q78T54 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vma21Q78T54 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.07□□□□□ -0.16
Vma21Q78T54 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Vma21Q78T54 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vma21Q78T54 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vma21Q78T54 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.06□□□□□ -0.16
Vma21Q78T54 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vma21Q78T54 Mir5133-201ENSMUST00000174955 77 ntBASIC14.06□□□□□ -0.16
Vma21Q78T54 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Gm26524-201ENSMUST00000192339 390 ntBASIC14.06□□□□□ -0.16
Vma21Q78T54 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vma21Q78T54 Rab3c-203ENSMUST00000224180 967 ntBASIC14.06□□□□□ -0.16
Vma21Q78T54 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Vma21Q78T54 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vma21Q78T54 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms