Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Gm38285-201ENSMUST00000192928 922 ntBASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Casc1Q6TDU8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Casc1Q6TDU8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Gm13158-201ENSMUST00000122007 736 ntBASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Gm18666-201ENSMUST00000190039 958 ntBASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Casc1Q6TDU8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Casc1Q6TDU8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Casc1Q6TDU8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Casc1Q6TDU8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Casc1Q6TDU8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.58■□□□□ 0.89
Casc1Q6TDU8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.58■□□□□ 0.89
Casc1Q6TDU8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.58■□□□□ 0.89
Casc1Q6TDU8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.58■□□□□ 0.89
Casc1Q6TDU8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.58■□□□□ 0.89
Casc1Q6TDU8 Mtag2-201ENSMUST00000058665 714 ntBASIC20.58■□□□□ 0.89
Casc1Q6TDU8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Casc1Q6TDU8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Casc1Q6TDU8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Casc1Q6TDU8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Casc1Q6TDU8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Casc1Q6TDU8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Casc1Q6TDU8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Casc1Q6TDU8 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Casc1Q6TDU8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.56■□□□□ 0.88
Casc1Q6TDU8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms