Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Gm10566-201ENSMUST00000086739 996 ntBASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx58Q6Q899 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Gm26039-201ENSMUST00000158152 144 ntBASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Gm5587-201ENSMUST00000206270 674 ntBASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Gm7367-201ENSMUST00000057611 492 ntBASIC21.35■■□□□ 1.01
Ddx58Q6Q899 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx58Q6Q899 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Gm9013-201ENSMUST00000132939 882 ntBASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx58Q6Q899 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx58Q6Q899 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx58Q6Q899 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx58Q6Q899 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx58Q6Q899 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx58Q6Q899 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx58Q6Q899 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Ddx58Q6Q899 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Ddx58Q6Q899 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx58Q6Q899 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ddx58Q6Q899 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.32■■□□□ 1
Ddx58Q6Q899 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ddx58Q6Q899 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Ddx58Q6Q899 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Gm11355-201ENSMUST00000121120 306 ntBASIC21.32■■□□□ 1
Ddx58Q6Q899 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.32■■□□□ 1
Ddx58Q6Q899 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.32■■□□□ 1
Ddx58Q6Q899 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.32■■□□□ 1
Ddx58Q6Q899 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx58Q6Q899 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ddx58Q6Q899 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Gm8969-201ENSMUST00000199694 526 ntBASIC21.31■■□□□ 1
Ddx58Q6Q899 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx58Q6Q899 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ddx58Q6Q899 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.3■■□□□ 1
Ddx58Q6Q899 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms