Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.86■□□□□ 0.13
Smarcd3Q6P9Z1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.85■□□□□ 0.13
Smarcd3Q6P9Z1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Gm13148-201ENSMUST00000118892 745 ntBASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Rab3c-203ENSMUST00000224180 967 ntBASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarcd3Q6P9Z1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcd3Q6P9Z1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcd3Q6P9Z1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcd3Q6P9Z1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcd3Q6P9Z1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarcd3Q6P9Z1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Smarcd3Q6P9Z1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Mir5133-201ENSMUST00000174955 77 ntBASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Smarcd3Q6P9Z1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms