Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Gm10698-201ENSMUST00000182663 604 ntBASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sp140Q6NSQ5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sp140Q6NSQ5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sp140Q6NSQ5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sp140Q6NSQ5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.52■□□□□ 0.39
Sp140Q6NSQ5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sp140Q6NSQ5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sp140Q6NSQ5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sp140Q6NSQ5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Gm10517-202ENSMUST00000192970 758 ntBASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sp140Q6NSQ5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Gm4974-201ENSMUST00000209974 875 ntBASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sp140Q6NSQ5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sp140Q6NSQ5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sp140Q6NSQ5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sp140Q6NSQ5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms