Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.33■□□□□ 0.68
Tpm4Q6IRU2 Gm29791-202ENSMUST00000207888 369 ntBASIC19.33■□□□□ 0.68
Tpm4Q6IRU2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.33■□□□□ 0.68
Tpm4Q6IRU2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm4Q6IRU2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm4Q6IRU2 Flg-201ENSMUST00000050758 1488 ntBASIC19.33■□□□□ 0.68
Tpm4Q6IRU2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm4Q6IRU2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Gm10849-201ENSMUST00000100397 618 ntBASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm4Q6IRU2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Gm26571-201ENSMUST00000181399 666 ntBASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Gm44549-201ENSMUST00000208351 577 ntBASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.31■□□□□ 0.68
Tpm4Q6IRU2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm4Q6IRU2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Zfp783-201ENSMUST00000095946 670 ntBASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm4Q6IRU2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Mir5133-201ENSMUST00000174955 77 ntBASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Haglr-201ENSMUST00000100000 2085 ntBASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm4Q6IRU2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms