Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt39Q6IFX4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt39Q6IFX4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Krt39Q6IFX4 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.08■□□□□ 0.65
Krt39Q6IFX4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Krt39Q6IFX4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Krt39Q6IFX4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Krt39Q6IFX4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Krt39Q6IFX4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Krt39Q6IFX4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Krt39Q6IFX4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.08■□□□□ 0.65
Krt39Q6IFX4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Krt39Q6IFX4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.08■□□□□ 0.64
Krt39Q6IFX4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.08■□□□□ 0.64
Krt39Q6IFX4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Krt39Q6IFX4 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.08■□□□□ 0.64
Krt39Q6IFX4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Krt39Q6IFX4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Krt39Q6IFX4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Krt39Q6IFX4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Krt39Q6IFX4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Krt39Q6IFX4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt39Q6IFX4 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Gm4968-201ENSMUST00000071458 858 ntBASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.06■□□□□ 0.64
Krt39Q6IFX4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms