Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cep290Q6A078 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cep290Q6A078 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cep290Q6A078 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cep290Q6A078 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cep290Q6A078 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cep290Q6A078 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cep290Q6A078 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cep290Q6A078 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cep290Q6A078 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cep290Q6A078 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.64■□□□□ 0.41
Cep290Q6A078 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cep290Q6A078 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cep290Q6A078 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cep290Q6A078 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cep290Q6A078 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Cep290Q6A078 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.63■□□□□ 0.41
Cep290Q6A078 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.63■□□□□ 0.41
Cep290Q6A078 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cep290Q6A078 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.63■□□□□ 0.41
Cep290Q6A078 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.63■□□□□ 0.41
Cep290Q6A078 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cep290Q6A078 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.63■□□□□ 0.41
Cep290Q6A078 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Cep290Q6A078 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cep290Q6A078 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cep290Q6A078 Gm9727-201ENSMUST00000161387 555 ntBASIC17.62■□□□□ 0.41
Cep290Q6A078 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cep290Q6A078 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cep290Q6A078 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cep290Q6A078 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cep290Q6A078 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cep290Q6A078 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cep290Q6A078 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
Cep290Q6A078 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cep290Q6A078 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cep290Q6A078 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cep290Q6A078 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cep290Q6A078 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.62■□□□□ 0.41
Cep290Q6A078 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cep290Q6A078 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cep290Q6A078 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cep290Q6A078 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.61■□□□□ 0.41
Cep290Q6A078 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cep290Q6A078 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.61■□□□□ 0.41
Cep290Q6A078 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cep290Q6A078 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.61■□□□□ 0.41
Cep290Q6A078 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cep290Q6A078 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.61■□□□□ 0.41
Cep290Q6A078 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cep290Q6A078 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cep290Q6A078 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.6■□□□□ 0.41
Cep290Q6A078 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cep290Q6A078 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.6■□□□□ 0.41
Cep290Q6A078 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.6■□□□□ 0.41
Cep290Q6A078 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.6■□□□□ 0.41
Cep290Q6A078 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.6■□□□□ 0.41
Cep290Q6A078 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cep290Q6A078 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cep290Q6A078 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cep290Q6A078 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cep290Q6A078 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cep290Q6A078 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.6■□□□□ 0.41
Cep290Q6A078 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cep290Q6A078 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cep290Q6A078 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cep290Q6A078 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cep290Q6A078 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cep290Q6A078 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.59■□□□□ 0.41
Cep290Q6A078 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cep290Q6A078 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.59■□□□□ 0.41
Cep290Q6A078 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cep290Q6A078 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.59■□□□□ 0.41
Cep290Q6A078 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cep290Q6A078 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.59■□□□□ 0.41
Cep290Q6A078 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cep290Q6A078 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Cep290Q6A078 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms