Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six1Q62231 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.71■□□□□ 0.43
Six1Q62231 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.71■□□□□ 0.43
Six1Q62231 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Six1Q62231 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Six1Q62231 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Six1Q62231 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Six1Q62231 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.7■□□□□ 0.42
Six1Q62231 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Six1Q62231 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.7■□□□□ 0.42
Six1Q62231 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.7■□□□□ 0.42
Six1Q62231 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Gm4974-201ENSMUST00000209974 875 ntBASIC17.7■□□□□ 0.42
Six1Q62231 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.7■□□□□ 0.42
Six1Q62231 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.7■□□□□ 0.42
Six1Q62231 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six1Q62231 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six1Q62231 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six1Q62231 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Six1Q62231 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six1Q62231 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.69■□□□□ 0.42
Six1Q62231 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six1Q62231 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.69■□□□□ 0.42
Six1Q62231 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.69■□□□□ 0.42
Six1Q62231 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six1Q62231 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six1Q62231 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six1Q62231 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six1Q62231 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six1Q62231 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.69■□□□□ 0.42
Six1Q62231 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.68■□□□□ 0.42
Six1Q62231 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Gm20049-201ENSMUST00000219950 730 ntBASIC17.68■□□□□ 0.42
Six1Q62231 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Six1Q62231 Gm10602-201ENSMUST00000098239 609 ntBASIC17.68■□□□□ 0.42
Six1Q62231 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Six1Q62231 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Six1Q62231 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.68■□□□□ 0.42
Six1Q62231 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six1Q62231 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six1Q62231 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six1Q62231 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Six1Q62231 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Six1Q62231 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Six1Q62231 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six1Q62231 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Six1Q62231 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Six1Q62231 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Six1Q62231 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six1Q62231 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six1Q62231 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six1Q62231 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six1Q62231 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.67■□□□□ 0.42
Six1Q62231 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms