Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Mir5122-201ENSMUST00000175004 89 ntBASIC18.65■□□□□ 0.58
Atp13a4Q5XF90 Gm38027-201ENSMUST00000192315 235 ntBASIC18.65■□□□□ 0.58
Atp13a4Q5XF90 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a4Q5XF90 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a4Q5XF90 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a4Q5XF90 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.65■□□□□ 0.58
Atp13a4Q5XF90 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atp13a4Q5XF90 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Atp13a4Q5XF90 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a4Q5XF90 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Timm23-208ENSMUST00000226683 750 ntBASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atp13a4Q5XF90 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atp13a4Q5XF90 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Atp13a4Q5XF90 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.62■□□□□ 0.57
Atp13a4Q5XF90 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atp13a4Q5XF90 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atp13a4Q5XF90 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atp13a4Q5XF90 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atp13a4Q5XF90 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atp13a4Q5XF90 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atp13a4Q5XF90 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atp13a4Q5XF90 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Gm21814-202ENSMUST00000203277 873 ntBASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Gm3375-201ENSMUST00000203929 796 ntBASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp13a4Q5XF90 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 Gm7638-201ENSMUST00000121348 967 ntBASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.6■□□□□ 0.57
Atp13a4Q5XF90 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms