Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Gm8969-201ENSMUST00000199694 526 ntBASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps54Q5SPW0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.73■□□□□ 0.91
Vps54Q5SPW0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps54Q5SPW0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps54Q5SPW0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.72■□□□□ 0.91
Vps54Q5SPW0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps54Q5SPW0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps54Q5SPW0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Vps54Q5SPW0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.72■□□□□ 0.91
Vps54Q5SPW0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps54Q5SPW0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.72■□□□□ 0.91
Vps54Q5SPW0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps54Q5SPW0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Gm2274-201ENSMUST00000184539 609 ntBASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Gm7370-201ENSMUST00000219471 767 ntBASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Vps54Q5SPW0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Gm18959-201ENSMUST00000208954 655 ntBASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps54Q5SPW0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps54Q5SPW0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Vps54Q5SPW0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.68■□□□□ 0.9
Vps54Q5SPW0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps54Q5SPW0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Vps54Q5SPW0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps54Q5SPW0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps54Q5SPW0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps54Q5SPW0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps54Q5SPW0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.68■□□□□ 0.9
Vps54Q5SPW0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps54Q5SPW0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms